Introduction
Cropland soils are a major source of nitrous oxide (N
2O), a potent greenhouse gas that can persist for over 100 years in the atmosphere and contribute to climate change and destruction of stratospheric ozone (
Ravishankara et al. 2009;
IPCC 2014). In regions where agricultural soils are seasonally frozen, freeze–thaw (FT) cycles have been shown to contribute 30%–90% of annual N
2O emission and exclusion of FT effects could lead to a 17%–28% underestimation on global annual N
2O emission (
Wagner-Riddle et al. 2017). Microbial denitrification has been identified through
15N tracer studies as the dominant contributor to high thaw fluxes (
Ludwig et al. 2004;
Wagner-Riddle et al. 2008). During thawing events, soil conditions become favourable to denitrification because of increased soil temperature, soil water content (SWC) from snowmelt, and substrate (C and N) availability (
Congreves et al. 2018). Cover crops have shown potentials to alter these soil conditions before and during the nongrowing season (NGS) and thus provide opportunities for mitigating thaw N
2O emission (
Wagner-Riddle and Thurtell 1998). Although many have studied the effects of cover crops on soil organic carbon and soil physical properties (
Poeplau and Don 2015), much remains unknown in understanding the impact on N
2O emissions, particularly during the NGS in cold climate regions.
There are several potential pathways in which cover crops can either mitigate or amplify FT emissions, first in the substrate for microbial processes during the FT cycles and second in effects on soil temperature and moisture. As one of its main management functions, cover crops can take up excess nitrogen (N) in soil after the cropping season, and thus can limit nitrate (NO
3−) for denitrification (
Ussiri and Lal 2013). However, cover crops can only maintain this effect while the plants are alive. Termination of cover crops can occur through cultivation or killing through frost, and the organic N in turn feeds into the N cycle and potential N
2O emissions, particularly if the cover crop residues have a low C:N ratio (as a conventional rule: less than 25:1) (
Robertson and Groffman 2015). However, the fate of substrate inputs from cover crops is likely to differ between mechanical mixing of cover crops into soil during fall cultivation versus from winter-killed cover crops.
Soil temperature affects soil N transformation directly by accelerating organic matter decomposition and microbial metabolic turnover (
Ussiri and Lal 2013) and indirectly as both oxygen and N
2O solubilities in water change with temperature. At low temperatures, an increased oxygen solubility may reduce denitrification activity and thus N
2O production (
Coyne 2008), while at temperatures below freezing, ice crystal disruption of soil and cell lysis (i.e., of microbial and plant tissues) may lead to high N
2O fluxes with subsequent thawing (
Wagner-Riddle et al. 2007;
Congreves et al. 2018). Cover crops can alter soil temperature by trapping early snowfall that insulates the soil surface in winter and can thus reduce soil freezing depth and severity and/or dampen temperature variation (FT cycles), reducing N
2O emissions. Cultivation of cover crops in the fall may eliminate the insulation effect of cover crops and decrease overwinter surface soil temperatures (more intense freezing or larger freezing degree days (FDD)) (
Wagner-Riddle and Thurtell 1998;
Yang et al. 2018). Additionally, during a thawing event, water from melting snow and ice can fill soil pores, transport substrates to microbes, and create an oxygen-deficient environment favouring denitrification and a rapid increase in N
2O fluxes (
Goodroad and Keeney 1984;
Prieme and Christensen 2001). Cover crops may impact water content in the growing season/fall leading up to FT by reducing SWC through increased transpiration, or conversely, cover crops may increase soil water by reducing soil surface evaporation, increasing rainfall infiltration and soil water storage capacity (
Basche et al. 2016). Because of these multifaceted effects, the impact of cover crops and their termination on N
2O emissions during FT cycles is not well understood with multiple potential pathways to either increase or decrease N
2O production.
The majority of N
2O emission studies have been done with discontinuous measurement methods, mainly through manual chamber techniques performed with nonflow-through nonsteady-state chambers (
Bouwman 2002). While manual chamber techniques have advantages in terms of simplicity, affordability, and versatility, the low measuring frequencies (often once per week) may lead to inaccurate estimates of N
2O fluxes (
Rochette and Eriksen-Hamel 2008). In cold environments, winter site accessibility and snow or ice cover may also limit viability of chamber measurements. Indeed, in a meta-analysis of N
2O emissions using 26 cover crop studies, only 4 had investigated the NGS (
Basche et al. 2014). Micrometeorological techniques, such as the flux-gradient method (
Wagner-Riddle et al. 2007), allow for field-scale measurements while capturing ephemeral fluxes that characterize FT events.
This study investigated the effects of cover crops and termination practices on soil conditions and N2O emissions during the NGS using a micrometeorological method. The objectives were (i) to assess individual and combined effects of cover cropping and fall cultivation on soil conditions and N2O emissions during FT cycles during the NGS, and (ii) to evaluate individual and combined effects of cover cropping and fall cultivation on total NGS N2O emissions. We hypothesize that fall cultivation (with fall cultivation, +FC; without fall cultivation, −FC) results in more intense freezing and increased NGS N2O emissions, with highest values expected when cover crops (with cover crops, +CC; without cover crops, −CC) are cultivated into the soil (+CC+FC), due to more inputs of substrate for denitrification, followed by fall cultivation without cover crops (−CC+FC). Lower emissions were expected when there is no fall cultivation (−CC−FC or +CC−FC), with an expected effect (in direction and magnitude) from cover crops depending on extent that soil temperature, water, and substrate availability are affected in the NGS.
Materials and methods
Site description, experimental design, and management
The experiment took place at a long-term N
2O flux study site established in 2000 at the University of Guelph Elora Research Station, Ontario, Canada (43°39′N, 80°25′W; 376 m), as described in previous publications (
Jayasundara et al. 2007;
Wagner-Riddle et al. 2007;
Congreves et al. 2018;
Ferrari Machado et al. 2020). Measurements for this study were conducted from 31 October 2018 to 30 April 2019. Soil at the site is an imperfectly drained Guelph silt loam (29% sand, 52% silt, 19% clay for the 0–15 cm layer;
Jayasundara et al. 2007) and experiences a humid continental climate with cold winters (Köppen–Geiger Dfb). In each of the previous 3 years, there were no significant differences in NGS N
2O emissions between study fields at the site despite significant differences during the growing season detected between nitrogen treatments applied to corn (
Ferrari Machado et al. 2020). Detailed soil description and site history can be found in previous publications (
Sulaiman et al. 2017;
Ferrari Machado et al. 2020).
N
2O was measured over four fields (4 ha each), within a 30 ha area of aerodynamically homogeneous land planted with the same cash crop during the growing season, using a flux-gradient method (
Wagner-Riddle et al. 1996,
2007). Corn was grown at the site from 2012 to 2018 as described in
Baral et al. (2022). On 17 May 2018, the fields were cultivated, and 154 kg N ha
−1 of urea was broadcasted and incorporated by disking. Corn was planted in all four fields at 80 000 seeds ha
−1 with 76 cm row spacing on the following day. In two of the fields, a two-species cover crop mixture was underseeded to corn at the sixth leaf stage on 20 and 21 June 2018 using a manual seed spreader. The cover crop mixture consisted of crimson clover (
Trifolium incarnatum) seeded at 6.7 kg ha
−1 and perennial ryegrass (
Lolium perenne) seeded at 33.6 kg ha
−1 and its choice was based on a consultation with the Ontario Soil and Crop Improvement Association as part of a long-term project of studying diversified crop rotations including cover crops at our flux monitoring site. For soil and plant sampling, each field was divided into nine subplots on a 3 × 3 grid with flags marking the ends of gridlines. On 5 October 2018 and then again on 21 May 2019 (annual rye only as crimson clover was winterkilled and unmeasurable), cover crop samples were taken from the two +CC fields. In each sampling subplot, cover crop samples were taken by clipping all aboveground portion of plants within two randomly placed 0.5 m
2 frames. Samples taken from the same subplot were composited and then the composited sample was separated by cover crop species. This was repeated to obtain nine clover and nine ryegrass samples contained in preweighed paper bags from each of the two +CC fields. After taking fresh biomass weights, the samples were dried at 65 °C for at least 48 h until sample weights became stable. Dry biomass weights were then taken.
Corn plants were sampled on 10 October from all four fields to calculate grain and residue yields. Corn plant sampling was done in the same sampling subplots as described above. In each sampling subplot, three separate corn rows were randomly selected and all corn plants along 1 m in each row were clipped at about 5–10 cm above ground. Fresh corn samples from the same subplot were composited and a fresh weight of each composite sample was taken. Each sample was then separated into grain and stover, and the grain portion (on cobs without husks) was weighed separately before all plant samples were oven dried at 65 °C for 72 h. Dry weights of grain and stover were taken to calculate sample moisture and field grain and residue yield. Plant sampling indicated that on average the four fields yielded 12.8 Mg ha−1 of grain (adjusted to 15.5% moisture) and 9.8 Mg ha−1 of residue dry biomass when combine-harvested on 30 October 2018. Fall cultivation with disk plow to a depth of 10 cm took place immediately following harvesting in two fields with and without cover crops, leaving very little visible residue on the surface. Corn residues were left on soil surface of the two −FC fields. Before the fields were covered by snow within the following two weeks, all four fields were weed free. The study consisted of measurements conducted in four 4 ha fields managed according to (i) no cover crops and no fall cultivation (−CC−FC), (ii) no cover crops with fall cultivation (−CC+FC), (iii) cover crops that are not terminated in the fall, i.e., with no fall cultivation (+CC−FC), and (iv) cover crops that are terminated with fall cultivation (+CC+FC).
Nitrous oxide flux
N
2O was measured with the flux-gradient method, and the fluxes were determined using (
Arya 2001):
where
u* is the friction velocity,
k is the von Karman constant (=0.41), Δ
C is the difference in measured N
2O concentration between two sampling heights,
z1 and
z2,
d is the displacement height, and
Ψ1 and
Ψ2 are the integrated Monin–Obukhov similarity functions for heat for the two sampling heights. Two 3D sonic anemometers (CSAT3, Campbell Scientific) were installed at the site, one that captured −CC fields and one for +CC fields, which provided near-continuous measurements of
u*. A five-cup anemometer tower (cups at 67, 102, 155, 236, and 354 cm) was also installed to provide backup estimates of
u* when the sonic anemometers did not yield data (e.g., under heavy rain or snow conditions, or equipment maintenance). A detailed description of the system can be found in
Wagner-Riddle et al. (2007).
To sample gas and measure N
2O concentration difference (Δ
C), one tower with two intakes drawing air at two heights (spaced 50 cm apart) was installed in each of the four fields. The heights of air intakes were adjusted over the study period, with the lower intake heights at approximately 1.9 times cover crop canopy height or winter snow cover depths, and the upper intake 50 cm above the lower intake. When soil surface was bare, intake heights were at 0.4 and 0.9 m for all four fields. Air intakes were programmed to switch between the two heights every 15 s through the activation of solenoid valves. Air samples from the four fields were drawn with a central vacuum pump into a manifold controlled by a datalogger (CR1000, Campbell Scientific). A second vacuum pump subsampled air from one of the sampled fields over 30 min from the manifold and directed it through a tunable diode laser trace gas analyzer (TGA100A, Campbell Scientific), which continuously measured N
2O concentrations at 10 Hz in the passing gas stream. Air sampled from the other three fields was discarded from the manifold through bypass valves. With this system, N
2O concentration differences for each field were measured for 30 min every 2 h, 12 times per day. Raw N
2O concentration data were filtered according to a list of criteria, including poor analyzer performance or site maintenance. From each of the 15 s intervals over which N
2O concentrations were measured, values measured during the transition between the two intake heights were eliminated, leaving approximately 5400 concentration values per height per 30 min period. Fluxes were filtered based on friction velocity (<0.1 m s
−1), poor analyzer performance, fetch conditions, and stability parameter outside a range of −5 to 2 (
Wagner-Riddle et al. 2007).
Soil mineral nitrogen levels
Concentrations of available mineral N (NO
3− and ammonium (NH
4+)) in the surface soil at 0–15 cm depth were determined. Soils were sampled once before harvesting of corn, on 19 October 2018, and once during the FT when soils were defrosted and uncovered, on 4 April 2019. Each of the four fields were divided into nine sampling subplots by a 3 × 3 grid as per the plant sampling scheme. A total of 36 soil samples were taken at each sampling event. Within each subplot, soil cores were taken at five locations between two rows of corn stubble. One subsample was then taken from the composite sample of the five cores. Collected soil samples were placed in a chest cooler for transportation and stored in a −20 °C freezer until extraction. Frozen samples were taken to a 4 °C refrigerator a day before extraction to thaw (
Esala 1995). Soil NO
3− and NH
4+ were then extracted with 2.0 mol/L KCl solutions as described in
Maynard et al. (2007). Extracts were analyzed for NO
3− and NH
4+ concentrations using a continuous flow analyzer (Seal AutoAnalyzer 3-AA3, Seal Analytical).
Soil water content and soil temperature
Soil volumetric water content (SWC) and soil temperature were continuously measured at 5 and 25 cm using time domain reflectometry probes (Model CS616, Campbell Scientific) and lab-built copper-constantan thermocouples, respectively, and averaged over 10 min intervals in all fields. The sensors were installed in pairs, each consisting of one SWC and one temperature sensor. Both SWC and temperature sensors in a pair were connected to a data logger (CR23X, Campbell Scientific). In each field, two pairs of sensors were installed at each measurement depth for a total of eight measurements (four temperature and four SWC) every 10 min. Two data loggers were installed on the shared boundary between the two +CC fields and between the two −CC fields, each connected with all eight pairs of sensors from the two adjacent fields. Collected data were manually downloaded from the data loggers monthly throughout the period.
SWC was calculated using equations derived from
Kulasekera et al. (2011). SWC and soil temperature measurements were filtered for any sensor or data logger malfunctions or damages by identifying and deleting erroneous values (0–1 m
3 m
−3 for SWC, or −50 to 50 °C for temperature). For sensors measuring the same field, filtered data points measured at the same depths were inspected again and then averaged. Both filtered SWC and temperature data were averaged into daily means, and any gaps in the daily averaged data were filled by linear interpolation with the function “na.approx” from package “zoo” (v1.8.7) in R (v3.6.3).
Other supporting data
Other data required for N2O flux calculations and interpretation, such as air temperature, precipitation, and on-the-ground snow depth, were obtained from the Environmental and Climate Change Canada weather station (WMO ID: 71352) located within 50 m from the research area. Snow depth measurements within the research area were also taken manually through the winter on a weekly basis. Ten measurements were taken across the four fields each time by walking a rectangular loop with the intake towers as the corners and taking measurements using a measuring stick along the path, including one taken near each intake tower and six taken at random locations within a few meters along the rest of the path. An average depth was recorded and used for intake height adjustments and to derive timing of snow melts.
Data and statistical analyses
Half-hourly N2O fluxes were calculated using filtered data. Due to the sequential sampling setup, a maximum of 12 half-hourly flux values were calculated for each plot per day. The average of the half-hourly flux values was used as daily N2O flux and then linearly interpolated where data gaps existed. Cumulative emissions over the NGS were calculated using the gap-filled daily N2O fluxes for each field.
Harsh weather, equipment maintenance or testing, and equipment removal due to field activities such as cultivating, planting, harvesting, and spraying were the main causes of continuous data gaps that varied from 1 to 9 days during the NGS. The latter was due to an intake valve leak found and fixed in the +CC−FC field 9 days following harvesting and reinstallation of equipment. The percentage of daily flux data capture during this NGS was 90.6% for −CC−FC, 89.6% for −CC+FC, 84.6% for +CC−FC, and 89.6% for +CC+FC.
An uncertainty test was performed to evaluate potential errors resulting from gap-filling when deriving cumulative N
2O emissions following procedure developed for carbon studies (
Falge et al. 2001;
Taki et al. 2018). Based on the existing gaps in the daily N
2O flux means for each field, five artificial gap scenarios were developed, each with a unique frequency of gaps of lengths varying from 1 to 5 days each. The total length of created gaps was set to not surpass 25% of the existing gap length in the measured daily flux time series. Artificial gaps, based on the scenarios developed, were created by removing measured daily N
2O flux data at random positions in the time series. The artificial gaps inserted were kept at least one location away from other gaps to ensure the individual gaps would not combine with each other. These time series with artificial gaps were then linearly interpolated to obtain a new filled daily flux series. Using a Monte Carlo method, this process was repeated 50 times for each of the five scenarios, resulting in a total of 251 sets of filled daily flux data, including the measured and filled dataset. The cumulative N
2O emission for each of the 251 sets of data was calculated and standard deviations between each of 250 generated sums and the sums from the original filled data were calculated as errors resulting from linear interpolation.
Distribution of N
2O fluxes were nonnormal (
Yates et al. 2006). Therefore, paired-sample Wilcoxon's signed-ranks test was used to examine statistical differences in medians of the half-hourly N
2O fluxes among the treatments, with the Bonferroni correction applied to reduce Type 1 errors of false positivity due to multiple comparisons (
Ferrari Machado et al. 2020). Four treatment pairs were compared to determine effects of cover crops and fall cultivation. Among the treatments, −CC−FC was considered the control treatment and compared with the other three treatments. We evaluated effect of fall cultivation (vs. −CC+FC), effect of cover crops (vs. +CC−FC), and combined effect of cover crops that are fall cultivated (vs. +CC+FC). Comparisons were done for the six-month NGS and for specific freezing and thawing events. Freezing events were defined as periods when the mean daily soil temperature measured at 5 cm depth for the four fields was below 0 °C for at least 48 h. Thawing events were defined as periods with air temperature above 0 °C for longer than 48 h since we have observed increased N
2O fluxes within this time frame of increased air temperature, when the top few millimeters of the soil are likely thawing (
Wagner-Riddle et al. 2010). Note that shorter (<48 h) thawing events during prefreezing or freezing periods were not included in the defined FT periods.
Comparisons of medians of daily measured soil temperature, volumetric water content, and half-hourly N2O fluxes were carried out using paired-sample Wilcoxon's signed-ranks test in R with the “wilcox.test” (R, v3.6.3) function. An independent sample t test was carried out to compare NO3− levels measured in the four fields in pairs. Gap-filled daily flux values were not considered for the tests to avoid biasing treatment comparisons but are presented to discuss NGS emission totals. The uncertainty in gap-filling detailed above was then used to determine differences in emission totals, verifying if totals overlapped between treatments taking the uncertainty into account.
Conclusion
During a six-month NGS following corn, a crimson clover and perennial ryegrass cover crop mix increased seasonal total N2O emission, although we note the limited growth of cover crops prior to the NGS. High N2O flux peaks were observed during F-3 and FT on +CC−FC, which may be explained by the nitrogen substrate released from winter-killed clover biomass. Cover crops (+CC) effectively reduced SWC throughout most of the NGS, which could have reduced denitrification and N2O emissions if the fields were not cultivated (−FC) and the cover crop species could survive through the winter. Fall cultivation alone increased N2O emissions, with or without the presence of cover crops. Cultivation (+FC) lowered soil temperature and water content during most of the beginning two-thirds of the NGS (Nov–Feb), increased soil temperature during the last one-third of the NGS (Mar–Apr), and increased SWC because of the earlier and accelerated melting in that period. Cover crop biomass incorporated (+CC+FC) to soil contributed to the highest seasonal total N2O emissions, with elevated N2O fluxes through all FT cycles except the prefreeze when cover crops were still living, and the FT period, during which the added nitrogen substrate from incorporated cover crop biomass was likely depleted. Our results emphasize the importance of cover crop selection and termination practices in mitigating N2O emissions. We focused on NGS emissions in a cold climate region, which to date has received little attention, but integration into full year or full crop rotation emissions will identify the overall effect of cover crops and inform management interventions from planting to the subsequent cropping season that mitigates N2O emissions.